We highly recommend to use our upgraded RBPmap web-server (including SFmap features and more) instead of SFmap.
Input
Genome:       Database assembly:
Input type:
Sequence (In FASTA format). (View example).
Genomic coordinates (chromosome:start-end:strand). (View example).
Paste your sequences/coordinates here: (Sequence length: 21-5,000 bp; Max. number of entries: 5,000)
Note that the input size limitations have changed in version 1.8.

Or, upload a file:
Motifs selection (optional, default: all motifs)
Advanced options (optional)
General options
E-mail address: (A link to the results will be sent to this address).
Enter a name for the current job (optional):
References:
  • Paz I., Akerman M., Dror I., Kosti I. and Mandel-Gutfreund Y. (2010)
    SFmap: a web server for motif analysis and prediction of splicing factor binding sites.
    Nucleic Acids Res., 38:W281-W285. [Full text article in PDF format].
  • Akerman M., David-Eden H., Pinter R. Y. and Mandel-Gutfreund Y. (2009)
    A computational approach for genome-wide mapping of splicing factor binding sites.
    Genome Biol., 10(3):R30. [Full text article in PDF format].
This web site is supported by Eliyahu Pen Research Fund