Versions information

Version 1.8 (Jun. 19, 2013)

  • The input size limitations have been changed:
    The maximal sequence length is now 5,000 bp.
    The maximal number of entries per job was changed to 5,000.
  • E-mail address is now an optional field.

Version 1.7 (Jan. 27, 2013)

  • hnRNP motifs were updated.
    Reference: Huelga SC, Vu AQ, Arnold JD, Liang TY, Liu PP, Yan BY, Donohue JP, Shiue L, Hoon S, Brenner S, Ares M Jr, Yeo GW. Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins. Cell Rep. 2012 Feb 23;1(2):167-78.

Version 1.6 (Apr. 8, 2012)

  • The motif 'acuaay' of the splicing factor QK1 (quaking) was added to SFmap motifs list.

Version 1.5 (Apr. 1, 2011)

  • SFmap hardware has been upgraded, decreasing the running time significantly.

Version 1.4 (Mar. 7, 2011)

  • The maximal number of entries per job was changed to 10,000.
  • E-mail address was changed to be a mandatory field.

Version 1.3 (Sep. 26, 2010)

  • An improved and faster BLAT search (SFmap uses BLAT in order to determine the genomic coordinates in cases the input is given as FASTA formatted sequences).

Version 1.2 (Sep. 19, 2010)

  • Added an 'Exact match' option of threshold (under 'Advanced options'); Threshold[significant] includes all exact match hits instead of using a p-value and threshold[suboptimal] is at p-value<0.05.
  • Old human genome version hg17 was removed from the database assembly options.

Version 1.1 (Jul. 5, 2010)

  • Added the latest human genome version (hg19).
  • Added an option to get SFmap's full functionality for mouse genome (mm9).
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